BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036A06LP1|AL430152
(926 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1512 1836 0.0
>3x_Contig1512
Length = 8803
Score = 1836 bits (926), Expect = 0.0
Identities = 926/926 (100%)
Strand = Plus / Plus
Query: 1 cgtaaccattcatcacagatcaacgatattactcatacctttgtaccacttaattaccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4539 cgtaaccattcatcacagatcaacgatattactcatacctttgtaccacttaattaccgt 4598
Query: 61 gatcctccacccaatgactaccagcaatttaatgcaccctagttcttatttcctcagtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4599 gatcctccacccaatgactaccagcaatttaatgcaccctagttcttatttcctcagtat 4658
Query: 121 ttgtacagttataaaatgtctcgaagaaggttgaattaattcacatgaatttaaaggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4659 ttgtacagttataaaatgtctcgaagaaggttgaattaattcacatgaatttaaaggttt 4718
Query: 181 cttattgaaatttagacacaaataacgtacatcaaggaattgttgaatacagaggaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4719 cttattgaaatttagacacaaataacgtacatcaaggaattgttgaatacagaggaataa 4778
Query: 241 ccttcaaagcaacgcaagtactgatataaagcgattagtgaatagcaattggctgcttag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4779 ccttcaaagcaacgcaagtactgatataaagcgattagtgaatagcaattggctgcttag 4838
Query: 301 aaacgttgccattgtcatacatttttgaatatttagagatctaaacgtttatttacagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4839 aaacgttgccattgtcatacatttttgaatatttagagatctaaacgtttatttacagga 4898
Query: 361 atcaataataatagggtcaaggtaattgagaaaagatctactagtttaaccacccttagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4899 atcaataataatagggtcaaggtaattgagaaaagatctactagtttaaccacccttagt 4958
Query: 421 tgcaatttcggtttataccatacggaaagggaaggaaagagagtaaggatactgcagtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4959 tgcaatttcggtttataccatacggaaagggaaggaaagagagtaaggatactgcagtca 5018
Query: 481 agtcttattagaagcgtttccttaaagttttggaagatatggatgcgatctggaagagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5019 agtcttattagaagcgtttccttaaagttttggaagatatggatgcgatctggaagagca 5078
Query: 541 caacggggcggtctgataccagcccatcgcaaagcactcagagcctgttaaatgacaagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5079 caacggggcggtctgataccagcccatcgcaaagcactcagagcctgttaaatgacaagc 5138
Query: 601 ttgttgagaagattatatatatggcattgcctgcctctaatgatctggctactgatacta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5139 ttgttgagaagattatatatatggcattgcctgcctctaatgatctggctactgatacta 5198
Query: 661 tagagaatagggtacaggcaggtgcaggaagacctggcttgtctgtgccgataatgagta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5199 tagagaatagggtacaggcaggtgcaggaagacctggcttgtctgtgccgataatgagta 5258
Query: 721 ggaacttcgtgcagatgaattcgaggcttggcgccccattcatgatcattgatgagataa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5259 ggaacttcgtgcagatgaattcgaggcttggcgccccattcatgatcattgatgagataa 5318
Query: 781 taaggatcttcaattggactaatgcagcttatactttatgcataatgtcattctattcgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5319 taaggatcttcaattggactaatgcagcttatactttatgcataatgtcattctattcgt 5378
Query: 841 ttctagtgttgaaaccattaccagtgcttgtatcgggtcctttcgtgtacattctatttg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5379 ttctagtgttgaaaccattaccagtgcttgtatcgggtcctttcgtgtacattctatttg 5438
Query: 901 gcatcatgtcaccaacgtatatggat 926
||||||||||||||||||||||||||
Sbjct: 5439 gcatcatgtcaccaacgtatatggat 5464
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6646
Number of Sequences: 1807
Number of extensions: 6646
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)